AutoFluorescent Proteins and Fusion Vectors: AFPs

Purchase of any Qbiogene AFP vector includes a license to use the product for all research applications.
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AFPs® (AutoFluorescent Proteins) are optimized variants of the Aequorea victoria green fluorescent protein. Modifications to the amino acid sequence of wtGFP have generated AFPs® that are brighter, more efficient, and have improved excitation and emission spectra. Our SuperGlo™GFP (sgGFP™) and SuperGlo™BFP (sgBFP™) are the brightest green and blue fluorescent proteins available today.

All of our sgAFP™ vectors feature the following :

  • AFPs® designed with mutations that optimize protein folding and fluorophore formation at 37°C.
  • Codon-optimized coding sequences to stabilize mRNA structure and enhance expression without restricting host range.
  • 'Kozak' optimized initiation codons to encourage efficient translation.

sgGFP™: SuperGlo™ Green Fluorescent Protein

  • Broadest Stoke's shift of all green variants
  • Single enhanced excitation peak

sgGFP™ is the only available GFP with a single enhanced excitation peak at 474 nm. All other popular variants have excitation peaks at or near 488 nm. All of these variants fluoresce green at ~509 nm. sgGFP™ is therefore the only GFP that has a Stoke's shift that exceeds the minimum of 30 nm recommended for easy visualization and sensitive detection. sgGFP™ can be readily detected on fluorimeters, fluorescent microscopes, and by fluorescent cell sorters(FACS). sgGFP™ is also the best partner for FRET with BFP.

Mutations:

F64L - improved solubility, and protein folding at 37°C; more rapid and efficient fluorophore formation.
S65C - a single excitation peak at 474 nm.
I167T - enhanced excitation peak at 474 nm.

sgBFP™: SuperGlo™ Blue Fluorescent Protein

  • Highest quantum yield of blue variants

sgBFP™ is the perfect partner for the GFP. It is brighter than other available blue variants, and its spectral properties make it easy to distinguish from GFP or YFP. sgBFP™ can be readily detected on fluorimeters, fluorescent microscopes, and by fluorescent cell sorters. Furthermore, the large overlap between the emission peak of sgBFP™ and the excitation peak of sgGFP™ make them perfect partners for FRET.

Mutations:

F64L - improved solubility, and protein folding
at 37°C; more rapid and efficient
fluorophore formation.
Y66H - a single excitation peak at 387 nm, and emission at 450 nm.
V163A - improved solubility and protein folding.

Excitation and Emission Peaks of AFPs®

  Excitation
Maxima (nm)
Emission
Maxima(nm)
wtGFP 395 (474) 509
S65T 488 507
sgGFP 474 509
sgBFP 387 450


Stoke's shift of 35 nm for improved detection
  • clear images
  • increased signal to noise ratio

AFP® Fusion Vectors

Feature Function
CMV promoter Drives high level expression in mammalian cells.
SV40 neo cassette Allows G418 selection of transformed cells.
MCS Multiple Cloning Site: 12 unique restriction sites on the N- or C-terminus of the AFPs coding sequences. Available in all three reading frames, (1,2, or 3).
"Kozak" optimized ATG Ensures efficient translation in mammalian cells.
Peptide linker Encourages independent folding of linked protein moieties and favors bi-functional fusion proteins. Composed of 4 to 6 Gly and/or Ala residues.
Fusion site Most vectors contain restriction sites that allow for the generation of N- or C-terminal fusions, with or without an MCS.
Pgk promoter Murine phosphoglycerate kinase promoter for long-term stable expression in ES cells or in vivo.
Pol II promoter Murine RNA polymerase II promoter for long-term stable expression in vivo, or in ES cells.
sgGFP-neo An sgGFP-neo fusion protein that confers both G418 resistance and green fluorescence so that all cells surviving G418 are necessarily fluorescent.
T7 promoter Drives very high level expression in bacteria that carry the T7. RNA polymerase gene.
pUC origin High copy number plasmid origin.

Storage
-20°C

Reporter Vectors

These basic reporter vectors can be used to generate fusion proteins between the C-terminus or N-terminus of a target protein and the AFP®.

The pQBI-pgk and pQBI-Pol II vectors can be used to generate stable transformants and transgenic animals.

Fusion Sites
Cat. No. Vector AFP Promoter N C MCS Comments Size
AFP2200 pQBI25f sgGFP CMV Y Y C-Term Alternative
C-terminus MCS
20µg
AFP2100 pQBI50f sgBFP CMV Y Y C-Term Alternative
C-terminus MCS
20µg
AFP2043 pQBI-pgk sgGFP-neo Pgk   sgGFP-neo fusion protein 20µg
AFP2044 pQBI-PolII sgGFP-neo Pol II   sgGFP-neo fusion protein 20µg

sgGFP™ and sgBFP™ Cloning Vectors

In order to facilitate the use of AFPs® as fluorescent tags, a panoply of fusion vectors are available. The pQBI25/50-fPA vectors contain short cloning sites at the N- and C-termini of the AFPs®, to allow the cloning of exogenous coding sequences (by PCR) with minimal additions. Three series of vectors, pQBI25/50-fN 1,2,3, pQBI25/50-fA 1,2,3 and pQBI25/50-fC 1,2,3, have complete Multiple Cloning Sites (MCS) in all three open reading frames, at the N- or C-terminus of the AFPs® coding region. These three series of vectors also have a peptide linker placed between the AFP, and the MCS to encourage independent folding of the two protein moities without hindrance. The fA series of vectors contain "Kozak" optimized initiation codons for optimal expression, whereas the fN series of vectors have no initiation codon, allowing the use of the endogenous sequences of the fusion protein. All of these vectors have been designed as functional cassettes, permitting the isolation of the CMV promoter region, AFPs® coding sequence, the polyadenylation signal sequence, or any combination thereof. Each vector also contains the SV40 neo cassette for biochemical selection of transformed cells.

sgGFP Cloning Vectors

Fusion Sites
Cat. No. Vector AFP Promoter N C MCS Linker Comments Size
AFP2210 pQBI25-fPA sgGFP CMV Y Y   Unique N- and
C-terminus restriction
sites for minimally
cloning PCR amplimers.
20µg
AFP2211 pQBI25-fN1 sgGFP CMV Y Y N-Term Y Requires functional
ATG codon
20µg
AFP2212 -fN2 sgGFP CMV Y Y N-Term Y Requires functional
ATG codon
20µg
AFP2213 -fN3 sgGFP CMV Y Y N-Term Y Requires functional
ATG codon
20µg
AFP2214 fN1 fN2 fN3         20µg of each of the 3
reading frames
20µg ea
AFP2221 pQBI25-fA1 sgGFP CMV Y Y N-Term Y   20µg
AFP2222 -fA2 sgGFP CMV Y Y N-Term Y   20µg
AFP2223 -fA3 sgGFP CMV Y Y N-Term Y   20µg
AFP2224 fA1 fA2 fA3         20µg of each of the 3
reading frames
20µg ea
AFP2231 pQBI25-fC1, sgGFP CMV Y Y C-Term Y   20µg
AFP2232 -fC2 sgGFP CMV Y Y C-Term Y   20µg
AFP2233 -fC3 sgGFP CMV Y Y C-Term Y   20µg
AFP2234 fC1 fC2 fC3         20µg of each of the 3
reading frames
20µg ea

sgBFP Cloning Vectors

Fusion Sites
Cat. No. Vector AFP Promoter N C MCS Linker Comments Size
AFP2110 pQBI50-fPA sgBFP CMV Y Y   Unique N- and
C-terminus restriction
sites for minimally cloning
PCR amplimers
20µg
AFP2111 pQBI50-fN1 sgBFP CMV Y Y N-Term Y Requires functional
ATG codon
20µg
AFP2112 -fN2 sgBFP CMV Y Y N-Term Y Requires functional
ATG codon
20µg
AFP2113 -fN3 sgBFP CMV Y Y N-Term Y Requires functional
ATG codon
20µg
AFP2114 fN1 fN2 fN3         20µg of each of the 3
reading frames
20µg ea
AFP2121 pQBI50-fA1 sgBFP CMV Y Y N-Term Y   20µg
AFP2122 -fA2 sgBFP CMV Y Y N-Term Y   20µg
AFP2123 -fA3 sgBFP CMV Y Y N-Term Y   20µg
AFP2124 fA1 fA2 fA3         20µg of each of the 3
reading frames
20µg ea
AFP2131 pQBI50-fC1 sgBFP CMV Y Y C-Term Y   20µg
AFP2132 -fC2 sgBFP CMV Y Y C-Term Y   20µg
AFP2133 -fC3 sgBFP CMV Y Y C-Term Y   20µg
AFP2134 fC1 fC2 fC3         20µg of each of the 3
reading frames
20µg ea

Subcellular Localization Vectors

We offer a number of sgGFP™ and sgBFP™ fusion vectors producing proteins that localize to various subcellular regions.

  • Increases the sensitivity of detection
  • Facilitates double labeling experiments
  • Enhances the stability of the fluorescence when ethanol-based fixatives are used
AFPs® Localized Blue Fluorescene
Cat. No. Vector Localization Description Promoter Size
AFP3101 pQBI-B23BFP Nucleolus Human B23-BFP CMV 20µg
AFP3104 pQBI-revBFP Nucleolus HIV-1 rev-BFP CMV 20µg


AFPs® Localized Green Fluorescence
Cat. No. Vector Localization Description Promoter Size
AFP3201 pQBI-B23sgGFP Nucleolus HumanB23-GFP CMV 20µg
AFP3202 pQBI-tatGFP Nucleolus/Nucleus tat-GFP CMV 20µg
AFP3203 pQBI-nefGFP Golgi, etc. nef-GFP CMV 20µg
AFP3207 pQBI-LTRgagGFP
(rev-dependent)
Cytoplasmic gag-GFP
(rev-dependent)
HIV LTR 20µg

AIDS Research Tools: AFP® Fusion Proteins

  • Generates fully bi-functional, localized, HIV-AFP fusion proteins
  • Gag-GFP, dependent on expression of functional rev-protein in the same cell, serves as a rapid and sensitive indicator of HIV infection
  • M10BLrev-AFP constructs localize to the nucleolus; M10BL defective
Cat. No. Vector Localization Description Promoter Size
AFP3104 pQBI-revBFP Nucleolus/Cytoplasm HIV-1 rev-BFP CMV 20µg
AFP3114 pQBI-LTRrevBFP Nucleolus/Cytoplasm HIV-1 rev-BFP HIV LTR 20µg
AFP3115 pQBI-LTRm10-BFP Nucleolus m10BLrev-BFP HIV LTR 20µg
AFP3202 pQBI-tatGFP Nucleolus/Nucleus tat-GFP CMV 20µg
AFP3203 pQBI-nefGFP Membrane associated
(Golgi, Endosomes etc)
nef-GFP CMV 20µg
AFP3205 pQBI-m10-GFP Nucleolus m10BLrev-GFP CMV 20µg
AFP3206 pQBI-vprGFP Nucleolus/Nuclear
membrane
vpr-GFP CMV 20µg
AFP3207 pQBI-LTRgag-GFP Cytoplasm gag-GFP HIV LTR
(Expression is
rev-dependent)
20µg

Anti-GFP Antibodies

We offer two monoclonal antibodies (mAb) for the detection of all of its GFPs. Anti-GFP mAbs are purified from the supernatant of mouse hybridomas. Both antibodies are highly specific for AFPs® and recognize GFP/BFP and all other variants.

The 11E5 mAb is ideal for detection of GFP and GFP-fusion proteins in Western analyses. Use of mAb 11E5 allows detection of as little as 10 ng of GFP using colorimetric methods, and will detect picogram quantities with chemiluminescent detection assays. Performing Western blots with the 11E5 mAb allows confirmation that GFP and GFP-fusion proteins are being expressed and are of the expected molecular weight.

The 3E6 mAb is used for immunoprecipitation, immunocytochemistry, and ELISA assays. The 3E6 is an IgG2a antibody, allowing purification of GFP and GFP-fusion proteins with either protein A or protein G.

Both antibodies are highly specific for GFPs in both bacterial and mammalian cell extracts, providing clean purifications and strong clean signals.

Storage
-80°C

Cat. No. Product Applications Quantity
AFP 5001 Anti-GFP mAb11E5 Western, ELISA 150µg
AFP 5002 Anti-GFP mAb 3E6 Immunoprecipitation,
Immunocytochemistry ELISA
150µg

Recombiant Proteins

Recombinat SuperGlo™ GFP and SuperGlo™ BFP can be used as standards to calculate the level of expression and correlate it to the relative fluorescence intensity.

Storage
-20°C

Cat. No. Product Description Quantity
AFP 5201 rGFP Protein Purified recombinant sgGFP 25µg
AFP 5202 rGFP Protein Purified recombinant sgGFP 100µg
AFP 5101 rBFP Protein Purified recombinant sgBFP 25µg
AFP 5102 rBFP Protein Purified recombinant sgBFP 100µg

 

 

 

 

 

 

 

 

 

 

   




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